Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015925254.1_cds_XP_016473511.1_65632
CDS Infomation

[gene=LOC107795393] [db_xref=GeneID:107795393] [protein=putative rRNA methyltransferase] [protein_id=XP_016473511.1] [location=join(80639..81112,81880..81927,82013..82168,82302..82348,82705..82855,82952..83013,83181..83367,83956..84045,85044..85183,85272..85398,86005..86991)] [gbkey=CDS]
Sequence

ATGGGTAAAGTGAAAGGAAAACATCGTCTGGACAAGTATTACCACCTAGCCAGAGAATGC
AGATACCGTTCAAGAGCTGCATTTAAGCTGATCCAGCTCAATTCCAAATTCTCCTTTCTC
CATGCATCTCAATCGGTTCTCGACCTTTGTGCCGCTCCCGGCGGTTGGATGCAGGTCGCC
GTCAAGAAAGTACCCGTCGGCAGCCTTGTTGTAGGCGTAGACATTGTTCCCATTAGGCCA
ATTCGAGGTGCAATTGCTGTACAAGAAGATATTACTACTCCAAAGTGCAAATCAACCATT
AAAAGGATCATGGCTGAAAAGGGTGTTAGAGGGTTTGATTTGGTCCTCCATGATGGGTCC
CCCAATATTGGTGGAGCTTGGGCTATGGAAGCTACTCAGCAGAATGCTTTGGTTATTGAT
TCTGTTAAACTTGCTGCTGATCTCTTAGCTCCTAATGGGACTTTTGTTACTAAGGTGTTT
AGATCTCAAGACTATACTGCTGTTCTTTACTGTCTAAGACAGCTTTTTGAGAGGGTTGAG
GTAGACAAACCTTTAGCAAGTCGTTCGGAATCTGCAGAAATATATATTATTGGTCTCAAA
TATAAGGCTCCTGCTAAGATTGACCCTCGCATTCTTGATATAAAGCACCTCTTTCAGGGG
GGTAAAGAACTTCCTAAGGTGGTCGATGTACTAAGAGGGACGAAGCAGAAGAGACACCGT
CATGGGTATGAAGATGGGGAGACACTCTTAAGAAAGGTATGCTCTGCTGCCGATTTTGTG
TGGTCCGATATCAAGAGCCTTGGTTCAGTTACTTCAATAACGTTTGATGATCCTGCTTCT
TTGCCAATGAGAAATCATCCTCTGACGACAGAAGAGGTTAAAACACTATGTGAGGACTTG
CGTATTTTGGGACAGCAAGACCTCAAACATCTTTCAAAGTGGCGTATGCTTATGAGGAAA
GCTTTGGCTCCTTCAGAGAAAACTAGTAATGCAAAAGCAGTAGATGAGTGTGAGAGTGAA
GAGGATGAAGATAAACGACTTGAAAAAGAAATGGAGGAGCTGAAGGGTACCGCACTGAGA
AAGAAGAAAAGAGAAAAAAGGCTTCTAGCTAAAAGACAAGCCAAGGGCAAAGCACGCGAC
GCGTTGGGGATGCAATCAGATGCAACTGAAGATGGTTATGTTGATCAGGAGCTGTTTTCC
CTAACATTGATCAAGTGCAAGAGAGGTGTAGCAGCTGTTGATGACAATGAATATGATGAT
GAGACTGCTGGAGTAAATAGTGAAGATGATGAAAATGACCTGGAAGCCCTGGAGAATGCA
TCTAGCGATGTGGACTCTGAAGAAGAACGCAGAATACGTGATGATGAAATAGAGAGGTTG
CTTGAGGACCCCAATGAAAGGTATGTGGATCGAGAGGAAAGAAAAACAAAGCGGAGAAAG
CAATCCAAAATATCTTACTTGGATGATAGTAAACTCTTGCAGGGTGGTGATGAAGATGGT
ATGACTCAAGACTTTGATGTTGATAAGGGAGATGATGAAGTGAATCCTCTAGTCATACCT
CTAGAAACTGCTCCATCTCAAGAGGAGGTTGTAAAAACATGGTTCACTCAAGATGTTTTT
GCTGAACCGGAAGATCAAGATATGTTGGACAAGTATAGCGGCGAAGATGAAATGCTAATA
GATCTAGCAGGAGAAAGATCCTCAAAACCTAAGACTCAGATAAGTGATGAATTGCTGGTA
GAGAATCCAGGTCTGACGAAGAAAAGAATGGATGGTTCGCTCCAAGTCCCAGCTTCTGAG
ACAGAAGATTTTGAGATTGTTCCTGCACCACCCACAGATTCGAGTGATTCCTCGTCTGAT
GAGTCAGATGAATTTGGCGACAGTAGCGATAAAAAGGCTGAAATAGTGGCTACAGCAAAG
AAGATGATTTTGAAAAAGCAGAGAGAATTAATGGTTGATGATGGTTACAATAAGTATATG
TTTCACGATGAGGGGTTGCCAAAGTGGTTCGTAGACGAGGAGAAAAGGCATCGACAGCCG
ATAAAGCCTGTGTCGAAAGAGGAGGTTGCTGCAATGAGAGCTCAGTTTAAAGCAATCAAT
GCTCGTCCAGCAAAGAAGGTAGCAGACGCCAAAGCACGAAAGAAAAGAGCTGCTCAGAGA
AAGCTTGAGAAGATTCGAAAGAGAGCTAACTCAATATCAGACCAAGCAGATATTTCTGAT
CGCTCAAAGAGTAGAATGATTGAACAGCTTTACAAGAAGGCAACACCTAAACCACCAGGA
AAAGAATATGTAGTGGCAAAGAGGGGTGTGCAAGTGAAGGTTGGCAAGGGGAAAGTTCTT
GTTGATCGACGAATGAAGAAGGATGCAAGAAGGCATGGAATGAGCAAGCAGGGCCCGAAG
AAGGGAGTACAAAAACTGAAAGGTCGACGGAAGGCTTCAACAACAGGCAAGAACGGGAAG
TCGATATAA

Peptide Sequence

PEP ID

XP_016473511.1
PEP Infomation

PREDICTED: putative rRNA methyltransferase [Nicotiana tabacum]
Sequence

MGKVKGKHRLDKYYHLARECRYRSRAAFKLIQLNSKFSFLHASQSVLDLCAAPGGWMQVA
VKKVPVGSLVVGVDIVPIRPIRGAIAVQEDITTPKCKSTIKRIMAEKGVRGFDLVLHDGS
PNIGGAWAMEATQQNALVIDSVKLAADLLAPNGTFVTKVFRSQDYTAVLYCLRQLFERVE
VDKPLASRSESAEIYIIGLKYKAPAKIDPRILDIKHLFQGGKELPKVVDVLRGTKQKRHR
HGYEDGETLLRKVCSAADFVWSDIKSLGSVTSITFDDPASLPMRNHPLTTEEVKTLCEDL
RILGQQDLKHLSKWRMLMRKALAPSEKTSNAKAVDECESEEDEDKRLEKEMEELKGTALR
KKKREKRLLAKRQAKGKARDALGMQSDATEDGYVDQELFSLTLIKCKRGVAAVDDNEYDD
ETAGVNSEDDENDLEALENASSDVDSEEERRIRDDEIERLLEDPNERYVDREERKTKRRK
QSKISYLDDSKLLQGGDEDGMTQDFDVDKGDDEVNPLVIPLETAPSQEEVVKTWFTQDVF
AEPEDQDMLDKYSGEDEMLIDLAGERSSKPKTQISDELLVENPGLTKKRMDGSLQVPASE
TEDFEIVPAPPTDSSDSSSDESDEFGDSSDKKAEIVATAKKMILKKQRELMVDDGYNKYM
FHDEGLPKWFVDEEKRHRQPIKPVSKEEVAAMRAQFKAINARPAKKVADAKARKKRAAQR
KLEKIRKRANSISDQADISDRSKSRMIEQLYKKATPKPPGKEYVVAKRGVQVKVGKGKVL
VDRRMKKDARRHGMSKQGPKKGVQKLKGRRKASTTGKNGKSI

Transcript Sequence

Gene sequence data has not been registered.